Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M9 EMT_UniqueNum	BreastC_M9 EMT_pVal	BreastC_M9 EMT_Unique	ColonC_M34 HOXA_UniqueNum	ColonC_M34 HOXA_pVal	ColonC_M34 HOXA_Unique
ACCAAAG_MIR9	0		0.000379483204424	61	7.27724396366e-07	ADAMTS5|ADAMTS6|AFAP1|ARHGAP24|ARHGEF17|ATP8B2|AXL|BACE1|BAHD1|CHST15|CNTN3|CNTN4|COL12A1|CRIM1|CTHRC1|DIO2|DSE|DTNA|ESYT1|FAM19A5|FBN1|FBN2|FOXP1|FRMD6|FSTL1|KIAA1217|KLF12|KLHL3|LMNA|LPP|MAP1A|MMP16|MYH9|NEDD4|NID2|NOTCH2|P4HA2|PCDH7|PDGFC|PDGFRB|PHLDB2|PIGZ|PLSCR3|PMP22|PRRX1|RBFOX2|RBMS3|RHOBTB1|RNF128|RNF144A|RUNX2|SGCD|SH3BGRL2|SLC6A6|SLC39A14|SOCS5|STK38L|TGFBI|TLN1|VGLL4|ZNF365	4	0.000758238684452	FOXG1|HMGA2|HOXA11|IGF2BP2
BENPORATH_EED_TARGETS	1	HOXA13	1.26317152687e-08	116	3.08219311054e-12	ADAMTS5|ADAMTS18|ADRA2A|AHR|B3GLCT|BACH2|BHLHE22|BHLHE41|BMP8A|CACNA1G|CEMIP|CH25H|CNRIP1|COL2A1|COL12A1|COL24A1|COLEC12|COMP|CORO6|CSMD1|CTGF|CXCL14|CYP1B1|CYP26A1|DGKI|DKK2|DOK6|DRD4|ELMOD1|EMX2|FBLN7|FBN2|FEZ1|FNDC1|FOXF2|FOXQ1|FZD1|FZD2|FZD10|GABRB2|GALNT10|GJB2|HIC1|HOPX|HOXD9|HTRA1|IGF2|IGFBP3|KCNJ6|KLK4|LAMP5|LAYN|LGR5|LOX|LRCH2|LRFN5|LTBP2|MAFB|METRNL|MOXD1|MSX1|NEFM|NKX3-2|NOG|NPR3|NPTX2|OAF|OLFML2B|PAPPA|PDE10A|PDGFRA|PIGZ|PITX2|PLXNA2|PLXNC1|PMP22|PODN|PRICKLE1|PRKG1|PTHLH|RAB32|RGCC|RNF128|ROBO3|RSPO1|RUNX2|SCIN|SDC2|SFRP4|SHISA2|SHISA6|SHOX2|SLC6A1|SLC30A4|SLC35D3|SLITRK4|SORCS2|SPON1|ST8SIA2|STMN2|TBX5|TLL1|TMEM59L|TRIM9|TWIST1|UAP1L1|UNC5C|VDR|VSTM4|WLS|WNT2|WT1|WT1-AS|ZBTB16|ZNF365|ZNF503	8	2.52603483442e-08	FOXG1|HOXA1|HOXA2|HOXA3|HOXA4|HOXA7|HOXA9|HOXA10
CDX2_Q5	0		9.81603415008e-05	31	0.000196284944325	ADAMTSL1|BACH2|BNC2|C1QTNF7|CACNA1C|CADM1|CFL2|DCHS1|DTNA|ECM2|FOXP1|HOXD9|KIAA1549L|LOX|LRCH1|LSAMP|MEIS1|MEIS2|MN1|NID2|NREP|NRP1|NTF3|PAPPA|PCDH7|PDZRN4|PTH1R|SLIT3|TBX5|TWIST1|ZFPM2	6	3.5738676641e-08	HMGA2|HOXA2|HOXA3|HOXA7|HOXA9|HOXA11
CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN	0		7.48804178758e-07	81	3.67093661943e-17	ACTN1|ADD3|AKT3|ALDH1A3|ANKH|ANTXR1|ANXA1|ARHGAP23|ATP10D|AXL|BICC1|BMP1|C1R|C1S|C3|CALD1|CAVIN1|CAVIN3|CCDC80|CD109|CDH13|CFL2|CLIC4|CLMP|COL8A1|CYB5R3|DCBLD1|DSE|EHBP1|EVA1A|F2RL1|FAP|FBLIM1|FOXQ1|FRMD6|FST|FSTL1|GAS1|GJC1|GLIPR1|GNG12|GPX8|HRH1|HTRA1|IGFBP6|INHBA|ITGB1|LAMC1|LINC01279|LOX|LOXL2|LUZP1|MAP4K4|MIR22HG|MIR100HG|MMP14|MYO1B|NNMT|NRP1|NT5E|NXN|PDGFC|PHLDB2|PLAU|PLS3|RBFOX2|RBMS3|RFLNB|RGCC|SCHIP1|SEPT10|SNAI2|SPATS2L|SRPX2|TGFBI|TWIST2|TWSG1|WLS|WWTR1|ZBTB16|ZDHHC2	6	1.49760835748e-06	HMGA2|HOXA1|HOXA3|HOXA5|IGF2BP2|SKAP2
CTGCAGY_UNKNOWN	1	HOXA13	0.00038595445154	69	0.000456083977338	ACVR1|ADAMTS2|ADD3|ANGPTL2|ANXA6|AXIN2|C1QTNF3|CALN1|CD99L2|CDH2|CDH13|CFL2|COL7A1|COPZ2|CRIM1|DIO2|DLC1|DNM1|DPT|DPYSL3|ETV1|FAM212A|FBXW7|FGF1|FGFR1|FHL3|FNDC5|FOXP1|FST|KLF10|KLF12|LGALS1|LRFN5|LRRC15|LY6H|MAN1C1|MAP1A|MAP4|MAPK7|MEIS1|MICU3|NBL1|NEDD4|NLGN2|NR2F1|NUAK1|OLFML2A|PCDH7|PCDHB5|PDGFRB|PNMA6A|RBFOX2|RBMS3|SALL1|SERPINF1|SGCD|SGIP1|SHF|SHOX2|SLC44A1|SPRED1|STMN2|THY1|TNFRSF12A|TSHZ3|UAP1L1|ZBTB20|ZBTB47|ZNF532	4	0.000315824925741	HOXA1|HOXA2|HOXA3|HOXA9
DAVICIONI_MOLECULAR_ARMS_VS_ERMS_DN	0		0.000248433831563	43	6.33645505741e-14	ADGRA2|ARHGEF40|BMP1|CACNA1G|CD248|COL5A2|COLEC12|CRTAP|DLC1|EFEMP2|EMILIN1|FBLN1|FBN2|GLT8D2|GULP1|ISLR|LAMA2|LPAR1|MAGEL2|MFAP2|MMP2|NUAK1|OLFML1|OLFML3|P3H3|PARVA|PDGFRL|PMP22|PRR16|PTH1R|PTN|RAB32|RBMS3|RRBP1|SDC1|SERPINH1|SLC39A14|TMEM45A|TNFRSF1A|TRIP6|WLS|ZFHX4|ZFP36L2	3	0.000496867663063	HMGA2|HOXA10|IGF2BP2
Developmental protein	1	HOXA13	2.46622605409e-11	105	3.85761136054e-11	ACKR3|ALPK3|ARHGAP24|AXIN2|B3GLCT|BICC1|BMP1|BMP8A|CADM1|DAB2|DACT1|DKK2|DKK3|EBF4|EDIL3|EFNB1|EFNB3|EMX2|ENC1|FAT3|FGF1|FZD1|FZD2|FZD10|GADD45B|GAS7|GLI2|GLIS2|GPR161|HEG1|HIC1|HILS1|HOPX|HOXD9|HOXD10|ITGA8|KIAA1217|KIF26B|LRIG3|LRP1|LRP4|MEF2A|MEIS1|MEIS2|MITF|MMP19|MN1|MSX1|NAV1|NOG|NOTCH2|NOTCH3|NRP1|NRP2|NXN|OLFML3|PDGFA|PDGFC|PDGFRA|PDGFRB|PDLIM7|PDPN|PITX2|PRRX1|PRRX2|PRTG|RAB23|RAPGEF2|ROBO3|ROR2|RORB|SATB2|SEMA3D|SEMA5A|SEMA6B|SFRP2|SFRP4|SHISA2|SHOX2|SLIT3|SNAI2|SPATA9|TBX5|TBX18|TDRD9|TENM4|TLL1|TLL2|TMEM2|TNFRSF12A|TSHZ3|TWIST1|TWIST2|TWSG1|UNC5B|UNC5C|VEGFC|VENTX|WLS|WNT2|WNT5A|WNT5B|ZC4H2|ZFP36L2|ZNF423	10	1.07484074764e-11	FOXG1|HOXA1|HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA9|HOXA10|HOXA11
FOXO1_02	0		2.08270037641e-05	32	4.02200454864e-05	C1QTNF3|CACNA2D1|CADM1|CD109|CDKN1A|CDKN1C|CFL2|CLIP2|DTNA|EML1|ETV1|FOSL2|FOXO1|FSTL1|KLF9|KLF12|LIX1L|MAP4K5|MEIS2|MITF|MMP13|MRGPRF|NEDD4|NR2F1|OSBPL5|PDGFA|PITX2|RORA|SATB2|ST5|TGFB3|TSHZ3	5	1.43396204184e-06	FOXG1|HOXA1|HOXA2|HOXA10|HOXA11
FREAC3_01	1	HOXA13	4.08910001248e-05	30	8.17814454067e-05	BNC2|C1QTNF6|C5ORF46|CADM1|CALD1|CDKN1A|CDKN1C|DCN|DTNA|ETV1|FAP|FOSL2|FSTL1|HMCN1|MAP4K5|MEIS2|MITF|MMP11|MRGPRF|MRVI1|NEDD4|NOG|PAPPA|PRICKLE2|RUNX1T1|SCG2|TGFB3|TNFRSF19|TSHZ3|ZBTB20	6	5.54842872298e-10	HOXA2|HOXA3|HOXA4|HOXA9|HOXA10|HOXA11
GSE21546_WT_VS_SAP1A_KO_AND_ELK1_KO_DP_THYMOCYTES_DN	0		0.000549902561032	26	0.000433167423096	ADGRA2|ANKRD6|ANTXR2|ARHGAP23|ATP8B2|ATP10D|AXL|BACH2|FSTL1|KANK2|LRRC4C|LUZP1|MAGEH1|MAP4|MEG3|MMP2|MYLK|PARD3B|PARD6G|PROCR|RASAL2|RCBTB2|SEMA3D|TCF4|TTC28|ZNF608	3	0.000666637698969	HMGA2|HOXA5|HOXA9
GSE24142_EARLY_THYMIC_PROGENITOR_VS_DN2_THYMOCYTE_FETAL_UP	0		1.66889891018e-05	30	1.0702877673e-05	ABCB4|CD81|CMTM3|CPQ|DENND5A|FHOD3|FSTL1|IGDCC4|IL1R1|IL4R|MEIS1|METRNL|MITF|MYADM|NDN|PLXNC1|PTTG1IP|PYGL|RAB31|RAB32|RAI14|RFLNB|RGS3|SHISA2|SNX9|SOCS5|SULF2|TMEM119|VCL|VIM	4	2.26751005306e-05	HMGA2|HOXA9|IGF2BP2|SKAP2
HFH4_01	0		0.000493586507971	24	0.000967922085693	ADAMTS14|CADM1|COL10A1|CRIM1|CYP26A1|ETV1|FSTL1|FZD10|GABARAPL1|MAP4K4|MITF|NREP|PDGFRA|PDZRN4|PPFIA2|RUNX1|RUNX1T1|SCHIP1|SLC44A1|SLIT3|TEAD1|TWIST1|VGLL3|ZNF423	4	1.92509302491e-05	HOXA3|HOXA4|HOXA10|HOXA11
Human Breast_Charafe-Jauffret06_1233genes (16288205-GeneTable2)	0		2.3572764398e-05	89	1.13412514462e-06	ACTN1|ADD3|AKT3|ANKH|ANTXR1|ANXA1|ANXA6|ARHGAP23|ATP10D|AXL|BICC1|BMP1|C1R|C1S|C3|C14ORF132|CADM1|CALD1|CAVIN1|CAVIN3|CCDC80|CD109|CDH13|CFL2|CLIC4|CLMP|COL8A1|CYB5R3|DCBLD1|DIP2C|DSE|EHBP1|EVA1A|F2RL1|FAP|FBLIM1|FOXQ1|FRMD6|FST|FSTL1|GAS1|GJC1|GLIPR1|GNG12|GPX8|HRH1|HTRA1|IGFBP4|IGFBP6|INHBA|ITGB1|LAMC1|LMCD1|LOX|LOXL2|LUZP1|MAP4K4|MIR22HG|MMP14|MXRA8|MYO1B|NNMT|NRP1|NT5E|NXN|PDGFC|PHLDB2|PLAU|PLS3|RBFOX2|RBMS3|RFLNB|RGCC|RIPOR3|RORA|SCHIP1|SNAI2|SNED1|SPATS2L|SRPX2|TGFB3|TGFBI|TWIST2|TWSG1|UAP1L1|WLS|WWTR1|ZBTB16|ZDHHC2	6	4.60114036514e-05	HMGA2|HOXA1|HOXA3|HOXA5|IGF2BP2|SKAP2
Human Leukemia_Haferlach09_500genes (19429869-TableS1)	1	HOXA13	0.000416011951443	36	0.000832023902886	ANKH|ARHGEF40|C20ORF194|COL1A2|COL8A2|CST3|DDR2|FEZ2|FGFR1|FRMD6|GAS6|GJA1|HOMER3|INHBA|LAMC1|LMNA|LPP|MAN1A1|MEIS1|MITF|NAV1|NOTCH2|OLFML3|OSBPL5|P3H1|PCNX1|PLAUR|PRICKLE1|RPS6KA2|SERPINF1|SFXN3|SLC35B4|SLC44A1|SPARC|ZNF503|ZNF608	10	2.87162109149e-16	HMGA2|HOXA1|HOXA2|HOXA3|HOXA4|HOXA5|HOXA7|HOXA10|HOXA11|HOXA11-AS
Human Leukemia_Radmacher06_157genes (16670265-TableS1)	0		8.10843930139e-05	15	0.000121293112278	CNN3|COL1A1|FGFR1|FHL2|FOXO1|MIR22HG|NBL1|NRP1|PMEPA1|PMP22|PXDN|RGS16|SNX9|TCF4|TMEM158	3	4.08756737498e-05	HOXA4|HOXA10|SKAP2
Human Leukemia_Takeda06_309genes (16818636-TableS2)	0		0.000457078123344	28	0.000176715147689	AHR|ALB|ARID5B|ATP10D|BEND6|BMP2K|CDKN1C|CH25H|COL24A1|ENTPD1|FGF18|FOXP1|HOPX|IGFBP4|LOX|MAFB|MEIS1|MIR21|NEGR1|PRSS23|PTPRD|RHOBTB1|SERPING1|TCN1|TGFBI|TRIM9|TTC28|ZNF503	3	0.000737441098999	HOXA3|HOXA5|HOXA7
Human Leukemia_Toren05_133genes (16140871-Table1)	0		7.49042636621e-07	23	5.01401563416e-08	ANKRD6|DPYSL3|EHD2|EXTL2|F2RL1|FBN1|FSTL1|KDELC1|ME3|MEIS1|NAP1L3|NDN|NPR3|NPTX2|NREP|PKD2|PLOD2|PLS3|SCHIP1|SERPING1|SV2A|TNFSF4|TRIP6	4	1.4479451169e-06	HMGA2|HOXA5|HOXA9|HOXA10
Human Leukemia_Verhaak05_568genes (16109776-TableS1)	0		0.000207155231758	53	2.66602679133e-06	ALDH2|ARHGEF17|CAVIN1|CHST15|CLIP3|CYP1B1|DCHS1|DSE|EHD3|F2RL1|FGFR1|FOXO1|FZD2|GJA1|HOMER3|HOPX|HSPG2|LAMC1|LAMP5|LMNA|LPAR6|MAFB|MAN1A1|MEF2A|MEG3|MEIS1|MMP2|MN1|MXRA7|MYH11|NBL1|NEDD4|NPR3|NT5E|PALM|PAM|PLAUR|PXDN|RPS6KA2|RUNX1|RUNX1T1|SCHIP1|SERPINF1|SERPING1|SPARC|SPON1|TCN1|TGFB1I1|TGFBI|THBS1|TMEM158|TMEM204|VCAN	4	0.000411644436725	HOXA4|HOXA5|HOXA7|HOXA10
JAATINEN_HEMATOPOIETIC_STEM_CELL_UP	0		2.6199207618e-06	48	1.29565577833e-08	AKT3|ANKRD6|BCAT1|BIVM|CALN1|CD109|COL5A1|COL24A1|CRIM1|CTHRC1|DPYSL3|EOGT|F2RL1|FAM171B|FRMD6|GOLIM4|KDELC1|LRCH2|ME3|MEG3|MEGF6|MEIS1|MICU3|MSRB3|NAP1L3|NDN|NEGR1|NPR3|NREP|PAM|PDGFC|PKD2|PLS3|PXDN|RCN1|RHOBTB1|RUNX2|SCHIP1|SERPING1|SLITRK4|SMARCA1|SMYD3|SV2A|TGFBRAP1|TMEM200A|TNS3|TRIP6|TRO	5	5.22688496582e-06	HMGA2|HOXA3|HOXA5|HOXA9|HOXA10
MODULE_220	0		8.19054740576e-05	58	3.71320724365e-12	ACTA2|ADAM12|AEBP1|B3GLCT|BMP1|CALD1|CASP14|COL1A1|COL6A3|COL7A1|COL11A1|CPZ|CTGF|CYP1B1|DDR2|DPYSL3|EDN2|EFNB1|EFNB3|ENC1|FBN1|FEZ1|FGF1|FHL3|FLNA|FZD2|GJA1|GREM1|HOXD10|IGF2|ITGB5|LAMA2|LUM|LY6H|MMP11|MSX1|MYH11|NDN|NGF|NRP1|PDGFRA|PDGFRB|PLOD1|PMP22|PRRX2|PTN|PTPRG|ROR2|SERPINF1|SLIT3|SNAI2|SPOCK1|ST8SIA2|STMN2|TBX5|TNNT3|WNT2|WNT5A	4	0.000163810944402	FOXG1|HMGA2|HOXA4|HOXA5
Mouse Breast_Wright08_416genes (18394172-S4GeneList)	0		5.33803667685e-05	38	1.43881886348e-05	ADD3|ADGRA2|ANTXR1|C3|COL1A2|COL3A1|COL11A1|COMP|CTTNBP2|CYS1|DCN|ECM1|EMILIN1|FBLN2|FOXF2|HEPH|HTRA1|IGDCC4|LAMA4|LAMB1|MAGEH1|MOXD1|MXRA7|NR2F1|PLXDC2|PTHLH|RNF128|SDC2|SFRP2|SFXN3|SH3PXD2B|SHISA2|SULF1|TNC|TNFRSF19|TPST2|TWIST1|ZBTB20	4	9.23725449022e-05	HMGA2|HOXA5|HOXA7|IGF2BP2
NKX62_Q2	0		0.000476218487664	30	7.10974007018e-05	ANKH|BNC2|C1QTNF3|CADM1|CALD1|DTNA|GREM1|LRFN5|LUZP1|MITF|MSRB3|MSTN|MYO1B|NLGN2|PDGFRA|PDZRN4|PRKAA1|PTH1R|RHOBTB1|SHOX2|SLC20A1|SLIT3|STMN2|TBX5|TGFB3|TMEM178A|TWIST1|UNC5B|ZBTB20|ZFPM2	3	0.000881339574627	HOXA4|HOXA10|HOXA11
OCT1_04	0		0.000462223852614	31	3.13537197663e-05	BNC2|C14ORF37|CACNA1C|CADM1|CDH13|DTNA|ETV1|FOXP1|GALNT1|HOXD10|JAM3|JAZF1|LMNA|LRMDA|MEIS1|MITF|MOXD1|NOTCH2|NPTX2|OLFML3|OMD|PDZRN4|PITX2|PTPRD|RUNX1|SHOX2|SLC38A4|TWIST1|VGLL3|ZBTB20|ZFPM2	3	0.000893093985461	FOXG1|HOXA3|HOXA10
PIT1_Q6	0		0.000263776197763	28	0.000491901031281	ACVR1|ADAMTSL1|ASPN|C1QTNF6|CACNA1C|CADM1|CCDC8|DCHS1|ENTPD1|FAP|FEZ1|IBSP|INHBA|ITGA8|MAP3K20|MEIS1|MEIS2|NOG|NPR3|NRP1|PITX2|RBFOX2|RORA|SALL1|TEAD1|TPM1|TWIST1|VGLL3	4	3.56513642454e-05	HOXA2|HOXA3|HOXA4|HOXA9
POU6F1_01	0		5.91005046019e-07	37	7.43702984271e-08	BNC2|CACNA1C|CADM1|CFL2|COL1A2|CTSK|CXORF57|DTNA|EMX2|ETV1|FBXW7|FOXP1|FSTL1|LRMDA|LRRC15|MEIS1|MEIS2|NGF|NR2F1|NTF3|OLFML3|PCDH7|PDZRN4|PITX2|PRICKLE2|PTH1R|RBFOX2|RHOBTB1|RORA|SCG2|TLL1|TMEM178A|TSPAN2|USP11|VGLL3|ZBTB20|ZFPM2	5	1.10763979361e-06	HOXA2|HOXA5|HOXA7|HOXA9|HOXA11
RADMACHER_AML_PROGNOSIS	0		0.000234271470351	14	0.000427667266953	CNN3|COL1A1|FGFR1|FHL2|FOXO1|MIR22HG|NBL1|PMEPA1|PMP22|PXDN|RGS16|SNX9|TCF4|TMEM158	3	4.08756737498e-05	HOXA4|HOXA10|SKAP2
RTAAACA_FREAC2_01	0		2.39473301783e-06	102	1.77639605301e-09	ABI3BP|ADAM12|ATXN1|AXIN2|AXL|BACH2|BNC2|C1QTNF3|C1QTNF6|CADM1|CADPS|CALD1|CD109|CDK14|CDKN1A|CDKN1C|CFL2|CILP2|CLIP2|COLEC12|CTGF|DCN|DLC1|DTNA|EHBP1|EML1|EMX2|ENOX1|ETV1|FBXL22|FBXW7|FHL2|FOSL2|FOXO1|FST|FSTL1|GADD45A|GJA1|GREM1|HMCN1|HOXD9|HOXD10|HSPG2|IBSP|IGFBP6|INHBA|KCNJ12|KLF9|KLF12|LPP|LRP1|MAP4K5|MEIS1|MITF|MMP13|MMP16|MN1|MRGPRF|MRVI1|MXRA8|MYLK|NEDD4|NID2|NINJ2|NTF3|OSR2|PALM|PAPPA|PCSK5|PDGFC|PDLIM3|PDZRN4|PITX2|PLAU|PLS3|PLXNA2|PTH1R|RNF128|RORA|RORB|RUNX1|SATB2|SBF2|SHOX2|SLC24A2|SMAD9|SULF1|SYNPO|TCF4|TGFB3|TNFRSF19|TRIM9|TSPAN4|UST|VCAN|VGLL3|WNT2|ZBTB16|ZFHX4|ZFP36L2|ZNF423|ZNF532	7	4.7876896396e-06	FOXG1|HOXA1|HOXA3|HOXA5|HOXA7|HOXA10|HOXA11
TAATTA_CHX10_01	0		0.00018368533519	89	7.10755067867e-09	ADD3|AFP|ALPK2|BACH2|BHLHE41|BMP1|BNC2|CADM1|CALD1|CALN1|CNN3|CNTN4|COL1A1|COL10A1|COL12A1|CORO6|CYTH3|DAAM2|DCN|DLC1|EMX2|ENTPD1|ETV1|FAP|FEZ2|FOXF2|FST|FZD2|FZD10|HAPLN1|ITGA8|ITGBL1|KIAA0355|LAMB1|LAMC1|LIMS1|LRFN5|LRRC15|MAP3K20|MITF|MSRB3|MSTN|MSX1|MYO1B|NDNF|NLGN2|NOTCH2|NPR3|NR2F1|NREP|NRP1|OSR2|PCNX1|PDGFRA|PDZRN4|PITX2|PLAU|PLXNA2|PMEPA1|PPFIBP1|PRRX1|PTH1R|PTPN21|RASL11B|RBFOX2|ROBO3|RORA|RORB|RUNX1T1|SALL1|SERPINB7|SH3BGRL2|SHOX2|SLC24A2|SOCS5|SSPN|STMN2|SULF1|SULF2|TLL1|TMEM117|TMEM178A|UNC5B|WNT5A|WT1-AS|YPEL4|ZBTB20|ZFHX4|ZNF423	5	0.00036736356283	FOXG1|HOXA2|HOXA4|HOXA5|HOXA11
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_8D_UP	0		0.000209739284239	22	0.000411155801394	ADGRA2|C3ORF80|DLC1|FGF18|FHL2|GJA1|HIC1|HOPX|IGFBP4|LAMP5|LXN|MEIS1|NEGR1|NOG|PALLD|PRSS23|RHOBTB1|SPOCK1|THBS1|TNFAIP6|TTC28|ZNF503	4	8.32276708319e-06	HOXA3|HOXA5|HOXA7|HOXA9
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_10D_UP	0		3.33289040745e-05	28	4.61710273855e-05	ADGRA2|ATP10A|BEND6|CADM1|CDKN1C|DLC1|EGLN3|FERMT2|FGF18|FN1|HOPX|LAMP5|MEIS1|NEGR1|NEXN|PALLD|SLITRK4|SPOCK1|TDRD9|THBS1|TIMP3|TMEM45A|TMEM200A|TNFAIP6|TRIM9|UST|ZEB1|ZNF503	4	2.04867807635e-05	HOXA3|HOXA5|HOXA7|HOXA9
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_16D_UP	0		0.000375742806358	23	0.000737608826258	ABCB4|ADGRA2|AHR|APCDD1|ATP10A|BEND6|C12ORF75|FHL2|FKBP1B|FN1|HOPX|LAMP5|LUM|MEIS1|NEGR1|PALLD|SLITRK4|SMYD3|TDRD9|THBS1|TMEM200A|WT1|XYLT1	4	1.38767864577e-05	HOXA3|HOXA5|HOXA7|HOXA9
TATTATA_MIR374	0		4.53204438239e-05	41	7.87307685363e-07	ACTN1|AFAP1L2|ARHGAP28|ARHGEF40|ATP8B2|ATXN1|BACE1|CEMIP|CNTN4|CRIM1|CSMD2|DZIP1L|FOXO1|FOXP1|GADD45A|HAPLN1|LCA5|MEIS1|METRNL|MMP14|MSX1|NOG|NPTX2|NTF3|NTM|NUAK1|PAPPA|PITX2|PMEPA1|RORB|RUNX2|SLC35D3|ST8SIA2|STMN2|SYNE1|TEAD3|UST|WNT5A|WNT5B|ZCCHC24|ZNF423	4	8.98535799624e-05	FOXG1|HOXA1|HOXA10|HOXA11
TGATTTRY_GFI1_01	0		0.000348514390059	32	0.000693814883426	ALPK2|C1QTNF7|CALN1|CCDC80|CDH13|CDK14|COLEC12|CRIM1|DTNA|FN1|GREM1|HOXD9|HOXD10|JAZF1|LRMDA|LSAMP|MEIS2|NAP1L3|NRP2|PITX2|RASGRF2|ROBO3|RUNX1T1|SALL1|TEAD1|TMEM117|TMEM178A|WNT2|ZBTB20|ZFHX4|ZFPM2|ZNF503	5	3.2138966916e-06	HOXA2|HOXA3|HOXA5|HOXA7|HOXA9
TGGNNNNNNKCCAR_UNKNOWN	0		0.000185555958659	49	1.313666905e-05	ACTA1|ADAMTSL2|ADD3|C1QTNF1|CAVIN1|COL6A3|CTHRC1|CYTH3|DDR2|DENND5A|DIO2|EFNB1|FAP|GLS|GNG12|KANK2|KERA|LIX1L|LMOD1|LOX|LRRC17|MAGEL2|MRVI1|MSRB3|NEFM|NR2F1|NRK|PCOLCE|PDGFRB|PDLIM7|PDZRN4|PODN|PTHLH|RASL11B|RIN2|SALL1|SALL4|SDC1|SFRP2|SGCD|SHISA6|SMAD7|ST6GALNAC5|TMEM178A|VCL|VIM|WISP2|WNT5A|ZFPM2	4	0.000357975248269	HMGA2|HOXA3|HOXA9|HOXA10
TTANTCA_UNKNOWN	0		0.000385960240834	93	1.04442898403e-06	ABI3BP|ACKR3|ACVR1|ADAM33|ADAMTS4|ADAMTS6|ADAMTSL1|ADAMTSL2|ALDH1A3|ARHGAP24|ATP10D|ATXN1|B3GLCT|BNC2|CADM1|CDK14|CNIH3|COL8A1|CRIM1|DGKI|DLC1|DNM1|FBN2|FBXW7|FGFR1|FOSL2|FOXP1|FSTL3|GREM1|HOMER3|IBSP|IGFBP6|ITGA11|JAZF1|KIAA1549L|LINC00597|LOX|LRMDA|LTBP2|MEIS2|MIR22HG|MITF|MMP3|MSTN|MYH11|MYLK|MYO1B|NEDD4|NEFM|NOG|NPTX2|NRP2|PCDH7|PITX2|PLS3|PMP22|PRICKLE1|PRRX1|PTPRG|RBMS2|RBMS3|ROBO3|RORB|RRBP1|RUNX1|RUNX1T1|SALL1|SERPINB7|SFRP4|SFXN3|SH3BGRL2|SHISA6|SLC44A1|SLITRK4|SMARCA1|SNTB2|SPON1|SSTR5-AS1|ST5|STMN2|SULF1|SULF2|SYNPO|TNFSF4|TSHZ3|TSPAN2|VCAN|VGLL4|ZEB1|ZFHX4|ZFPM2|ZNF423|ZNF532	5	0.000770876052683	HMGA2|HOXA1|HOXA2|HOXA5|HOXA9
WGTTNNNNNAAA_UNKNOWN	0		5.52424850213e-05	57	4.80538145223e-05	ADAMTS6|ALB|ALDH1A3|B3GLCT|BICD1|BNC2|C1QTNF7|C1RL|CALD1|CALN1|CDK14|CDKN1A|CHST15|COL12A1|COL22A1|CYP26A1|DCN|DENND5A|ENOX1|ETV1|FBXW7|FGFR1|FST|GLS|HMCN1|HOXD10|IGFBP6|KIAA0355|LPP|LRFN5|MEIS2|MITF|MMP2|NEFM|NOG|NREP|NRK|NTF3|PAPLN|PCDH7|PDZRN4|PITX2|PLXDC2|RBMS3|RGS3|RIN2|RUNX1T1|SEPT7|SGIP1|SHOX2|SLC20A1|TCF4|TIMP2|TNFRSF19|VCAN|ZBTB20|ZNF423	5	6.24311555204e-05	HOXA3|HOXA5|HOXA9|HOXA11|SKAP2
WONG_ADULT_TISSUE_STEM_MODULE	0		0.000140477084175	140	9.67775983899e-34	ACTN1|ADGRD1|AHRR|ANKH|ANTXR2|BGN|C1R|CACNA2D1|CADM1|CALD1|CAVIN3|CDH2|CDKN1A|CDKN1C|CLIC4|CNN2|CNN3|CNTN1|COL1A1|COL6A1|COL11A1|COL18A1|CPQ|CRIM1|CTGF|CXCL14|CYP1B1|DAB2|DIP2C|DKK3|DLC1|DPT|ENTPD1|FBLN2|FERMT2|FGF1|FKBP7|FKBP9|FN1|FOXP1|FOXQ1|FRMD6|FSTL1|FZD2|GABARAPL1|GJA1|GLIS2|GREM1|HTRA1|IGFBP3|IL1R1|ITGB5|KCND2|KLF9|KLF10|LAMA2|LAMB1|LAMC1|LATS2|LGALS1|LGR5|LPP|LRP4|LTBP2|MAN1A1|MEF2A|MEIS1|MITF|MOXD1|MPRIP|MYADM|MYL9|MYLK|MYO1B|NAP1L3|NAV1|NDN|NID1|NID2|NR2F1|NREP|NRK|P3H3|PAIP2B|PDGFA|PDLIM2|PDLIM3|PER1|PHLDB2|PKD2|PLS3|PLXDC2|PLXNA2|PMEPA1|PMP22|POSTN|PPIC|PROCR|PRSS23|PTN|PTPN21|PTTG1IP|PXDN|RAB20|RAI14|RFLNB|RGS4|RRAD|RRBP1|SCG5|SDC1|SERPINF1|SERPINH1|SKI|SLC6A6|SMAD7|SMOC2|SNX30|SORCS2|SPARC|SPON1|STXBP1|SYNPO|TAGLN|TCF4|THBS1|THBS4|TIMP3|TK2|TNC|TNFAIP6|TPM1|TPST1|TSPAN4|TTC28|UNC5C|VDR|WNT5A|ZBTB20|ZNF503	5	0.00028095416835	HOXA2|HOXA3|HOXA5|HOXA9|HOXA10
WTTGKCTG_UNKNOWN	0		7.40928463958e-05	53	0.000101355778487	ACVR1|ADAMTSL1|ADGRA2|B3GLCT|BACH2|BAHD1|C1S|CACNA1G|CALD1|CALU|CAVIN1|CCDC80|CDKN1A|CNN3|COL1A1|CYP26A1|DACT3|FOXP1|FST|HAS2|HEPH|IBSP|MAN1C1|MEIS1|MN1|NOTCH3|NRP1|NXN|OSBPL5|PALM|PARD6G|PDE10A|PPFIA2|PRELP|RORA|RUNX1T1|SBF2|SERPING1|SFXN3|SLC26A2|SLIT3|TBX5|TCF4|TEAD3|TGFB3|TLL2|TPM1|VCAN|VIM|WNT2|YPEL4|ZEB1|ZNF532	5	4.68299143047e-05	HMGA2|HOXA1|HOXA2|HOXA9|HOXA10
YCATTAA_UNKNOWN	0		2.66893033449e-06	62	1.53425555543e-06	ACVR1|ADAMTSL2|BACH2|BHLHE22|BNC2|C1QTNF7|CD55|CDK14|CDKN2B|CHST15|CKAP4|COL12A1|CTDSP2|CXCL14|EMX2|ENOX1|FBXL22|FSTL1|HOXD10|JAZF1|LIMS1|LMNA|LRCH1|LSM11|MITF|MMP19|MSTN|NDNF|NLGN2|NPR3|NPTX2|NR2F1|NRP1|NTM|PABPC5|PCDH7|PCNX1|PDGFRA|PITX2|PLXNA2|PMEPA1|PTGER1|PTH2R|RASGRF2|RHOBTB1|RORB|RUNX1|RUNX1T1|SATB2|SGIP1|SHISA6|SPRED1|ST8SIA2|SULF1|SV2A|TMEM178A|TPM2|TSHZ3|ZEB1|ZNF423|ZNF503|ZNF532	6	3.80360511355e-06	HOXA1|HOXA2|HOXA3|HOXA7|HOXA9|HOXA10
anatomical structure formation involved in morphogenesis [GoID:GO:0048646; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		5.61684105195e-05	139	3.77390865144e-20	ACKR3|ACTA1|ACTN1|ACVR1|ADAM12|ADGRA2|AKAP13|ALDH1A3|ARHGAP24|AXIN2|C3|CD109|CDH13|CFL2|CLIC4|COL1A1|COL2A1|COL5A1|COL5A2|COL6A1|COL7A1|COL8A1|COL8A2|COL11A1|COL12A1|COL18A1|CTGF|CTHRC1|CYP1B1|DCHS1|DCN|DLC1|ECM1|EDNRA|EHD2|EXT2|FAM20C|FAP|FBN2|FGF1|FGF18|FGFR1|FHL2|FHOD3|FN1|FOXO1|FZD1|FZD2|GJA5|GLI2|GREM1|HOPX|HSPG2|HTRA1|IL4R|ILK|INHBA|ITGA5|ITGA8|ITGAV|ITGB1|ITGB3|ITGB5|JAM3|JCAD|KIF26B|KLK4|KNDC1|LAMB1|LATS2|LMOD1|LOXL2|LUZP1|MAFB|MAPK7|MEF2A|MEIS1|MMP2|MMP14|MMP19|MSX1|MYH9|MYH11|NDNF|NKX3-2|NOG|NOTCH3|NRP1|NRP2|PARVA|PDGFA|PDGFRA|PDGFRB|PDPN|PHLDB2|PITX2|PLXDC1|PLXNA2|PRICKLE1|PRKD1|PTN|RGCC|ROCK2|ROR2|RORA|RUNX1|SALL1|SALL4|SCG2|SEMA5A|SERPINF1|SFRP2|SH3PXD2A|SKI|SNAI2|SPARC|SPHK1|SPRED1|SRPX2|SULF1|TBX5|TENM4|TGFBI|TGFBR1|THBS1|THBS2|THBS4|THY1|TMEM2|TNFRSF12A|TPM1|TWIST1|TWSG1|UNC5B|VEGFC|WLS|WNT2|WNT5A|WT1	6	0.000112336821039	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7|HOXA11
angiogenesis [GoID:GO:0001525; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		0.000235435946759	73	2.2390873591e-14	ACKR3|ACVR1|ADGRA2|ARHGAP24|C3|CDH13|CLIC4|COL8A1|COL8A2|COL18A1|CTGF|CYP1B1|DCN|ECM1|EDNRA|FAP|FGF1|FGF18|FGFR1|FN1|GJA5|GREM1|HSPG2|ITGA5|ITGAV|ITGB1|ITGB3|JAM3|JCAD|LOXL2|MAPK7|MEIS1|MMP2|MMP14|MMP19|MYH9|NDNF|NOTCH3|NRP1|NRP2|PARVA|PDGFA|PDGFRA|PDGFRB|PITX2|PLXDC1|PRKD1|PTN|RGCC|ROCK2|RORA|RUNX1|SCG2|SEMA5A|SERPINF1|SFRP2|SPARC|SPHK1|SPRED1|SRPX2|SULF1|TGFBI|TGFBR1|THBS1|THBS2|THBS4|THY1|TMEM2|TNFRSF12A|TWIST1|UNC5B|VEGFC|WNT5A	4	0.000470871893496	HMGA2|HOXA3|HOXA5|HOXA7
appendage development [GoID:GO:0048736; evidenceTypes:IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000192343683153	32	1.86696661276e-08	CACNA1C|COL2A1|COMP|FBN2|FGFR1|GJA1|GJA5|GLI2|GREM1|HOXD9|HOXD10|LRP4|MAP3K20|MSX1|NOG|OSR2|PAM|PCSK5|PITX2|PLXNA2|PRRX1|ROR2|RUNX2|SALL1|SALL4|SFRP2|SHOX2|SKI|TBX5|TWIST1|WNT5A|ZBTB16	3	0.00038466869664	HOXA9|HOXA10|HOXA11
appendage morphogenesis [GoID:GO:0035107; evidenceTypes:IBA|IC|IEA|IMP|ISS|TAS]	0		0.000125995466726	30	5.21917973462e-09	CACNA1C|COL2A1|FBN2|FGFR1|GJA1|GJA5|GLI2|GREM1|HOXD9|HOXD10|LRP4|MAP3K20|MSX1|NOG|OSR2|PCSK5|PITX2|PLXNA2|PRRX1|ROR2|RUNX2|SALL1|SALL4|SFRP2|SHOX2|SKI|TBX5|TWIST1|WNT5A|ZBTB16	3	0.000251985714272	HOXA9|HOXA10|HOXA11
blood vessel development [GoID:GO:0001568; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		6.2539496333e-05	104	4.33582447865e-21	ACKR3|ACTA2|ACVR1|ADGRA2|AHR|ANTXR1|ARHGAP24|C3|CDH2|CDH13|CLIC4|COL1A1|COL1A2|COL3A1|COL5A1|COL8A1|COL8A2|COL18A1|CTGF|CYP1B1|DCN|ECM1|EDNRA|FAP|FGF1|FGF18|FGFR1|FN1|FOXO1|GJA1|GJA5|GJC1|GREM1|HAS2|HEG1|HSPG2|ITGA5|ITGAV|ITGB1|ITGB3|JAM3|JCAD|LOX|LOXL1|LOXL2|LRP1|LUZP1|MAPK7|MEIS1|MMP2|MMP14|MMP19|MYH9|MYLK|NDNF|NEDD4|NOG|NOTCH3|NRP1|NRP2|PARVA|PCSK5|PDGFA|PDGFRA|PDGFRB|PITX2|PKD2|PLXDC1|PRICKLE1|PRKD1|PRRX1|PTN|RAPGEF2|RGCC|ROCK2|RORA|RUNX1|SCG2|SEMA5A|SERPINB7|SERPINF1|SFRP2|SMAD7|SPARC|SPHK1|SPRED1|SRPX2|SULF1|TBX5|TGFBI|TGFBR1|THBS1|THBS2|THBS4|THY1|TMEM2|TNFRSF12A|TWIST1|UNC5B|VEGFC|WNT2|WNT5A|WT1|ZFPM2	5	0.000125078992666	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7
blood vessel morphogenesis [GoID:GO:0048514; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		3.15064394021e-05	91	6.98676426958e-19	ACKR3|ACVR1|ADGRA2|ARHGAP24|C3|CDH2|CDH13|CLIC4|COL3A1|COL8A1|COL8A2|COL18A1|CTGF|CYP1B1|DCN|ECM1|EDNRA|FAP|FGF1|FGF18|FGFR1|FN1|GJA1|GJA5|GJC1|GREM1|HAS2|HEG1|HSPG2|ITGA5|ITGAV|ITGB1|ITGB3|JAM3|JCAD|LOX|LOXL2|LRP1|MAPK7|MEIS1|MMP2|MMP14|MMP19|MYH9|MYLK|NDNF|NEDD4|NOG|NOTCH3|NRP1|NRP2|PARVA|PDGFA|PDGFRA|PDGFRB|PITX2|PKD2|PLXDC1|PRKD1|PRRX1|PTN|RAPGEF2|RGCC|ROCK2|RORA|RUNX1|SCG2|SEMA5A|SERPINF1|SFRP2|SMAD7|SPARC|SPHK1|SPRED1|SRPX2|SULF1|TBX5|TGFBI|TGFBR1|THBS1|THBS2|THBS4|THY1|TMEM2|TNFRSF12A|TWIST1|UNC5B|VEGFC|WNT5A|WT1|ZFPM2	5	6.30128788041e-05	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7
cardiovascular system development [GoID:GO:0072358; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		7.8864871058e-05	108	1.4506586312e-21	ACKR3|ACTA2|ACVR1|ADGRA2|AHR|ANTXR1|ARHGAP24|C3|CDH2|CDH13|CLIC4|COL1A1|COL1A2|COL3A1|COL5A1|COL8A1|COL8A2|COL18A1|CTGF|CYP1B1|DCN|ECM1|EDNRA|FAP|FBXW7|FGF1|FGF18|FGFR1|FN1|FOXO1|GJA1|GJA5|GJC1|GREM1|HAS2|HEG1|HSPG2|ITGA5|ITGAV|ITGB1|ITGB3|JAM3|JCAD|LOX|LOXL1|LOXL2|LRP1|LUZP1|MAPK7|MEIS1|MMP2|MMP14|MMP19|MYH9|MYLK|NDNF|NEDD4|NOG|NOTCH3|NRP1|NRP2|NXN|PARVA|PCSK5|PDGFA|PDGFRA|PDGFRB|PDPN|PITX2|PKD2|PLXDC1|PRICKLE1|PRKD1|PRRX1|PTN|RAPGEF2|RGCC|ROCK2|RORA|RUNX1|SCG2|SEMA5A|SERPINB7|SERPINF1|SFRP2|SMAD7|SPARC|SPHK1|SPRED1|SRPX2|SULF1|TBX5|TGFBI|TGFBR1|THBS1|THBS2|THBS4|THY1|TMEM2|TMEM204|TNFRSF12A|TWIST1|UNC5B|VEGFC|WNT2|WNT5A|WT1|ZFPM2	5	0.000157729742116	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7
cartilage development [GoID:GO:0051216; evidenceTypes:IBA|IDA|IEA|IEP|IMP|ISS|NAS|TAS]	0		7.42480663786e-06	44	4.42927056009e-15	ADAMTS12|AXIN2|BMP1|BMP8A|COL1A1|COL2A1|COL11A1|COMP|CTGF|EVC|FGF18|FGFR1|GLI2|GREM1|LOXL2|LUM|MMP13|MSX1|NKX3-2|NOG|OSR2|PRRX1|PTH1R|PTHLH|RFLNA|RFLNB|ROR2|RUNX1|RUNX2|SATB2|SCIN|SERPINH1|SFRP2|SHOX2|SMAD9|SNAI2|SULF1|SULF2|TGFBI|TGFBR1|WNT5A|WNT5B|ZBTB16|ZEB1	4	1.48496132713e-05	HMGA2|HOXA3|HOXA5|HOXA11
chordate embryonic development [GoID:GO:0043009; evidenceTypes:IBA|IC|IDA|IEA|IEP|IMP|ISS|NAS|TAS]	0		9.44103506322e-06	61	1.44548536668e-05	ACVR1|ACVR2A|AXIN2|COL1A1|COL2A1|COL11A1|CTHRC1|DACT1|DCHS1|DLC1|EDNRA|FAM212A|FGFR1|FZD1|FZD2|GJA1|GLI2|GPR161|HEG1|HOPX|HOXD9|HOXD10|IGF2|ITGB1|KIAA1217|LATS2|LUZP1|MMP14|MMP16|MSX1|MYH9|NKX3-2|NOG|NRK|OSR2|PCSK5|PDGFRA|PITX2|PKD2|PLXNA2|PRICKLE1|PRRX1|RARRES2|RCN1|ROR2|RUNX2|SALL4|SATB2|SFRP2|SHOX2|SKI|SULF1|SULF2|TBX15|TGFB3|TGFBR1|TWIST1|WNT2|WNT5A|ZEB1|ZFPM2	6	4.42721645965e-06	HOXA1|HOXA3|HOXA5|HOXA7|HOXA9|HOXA11
circulatory system development [GoID:GO:0072359; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		0.000467178537321	146	4.46134616786e-25	ACKR3|ACTA2|ACVR1|ADGRA2|AHR|AKAP13|ALPK3|ANTXR1|ARHGAP24|AXIN2|BICC1|C3|CACNA1C|CDH2|CDH13|CLIC4|COL1A1|COL1A2|COL2A1|COL3A1|COL5A1|COL8A1|COL8A2|COL11A1|COL18A1|CTGF|CYP1B1|DCHS1|DCN|DLC1|ECM1|EDNRA|FAP|FBN1|FBXW7|FGF1|FGF18|FGFR1|FHL2|FHOD3|FN1|FOXO1|FZD1|FZD2|GJA1|GJA5|GJC1|GLI2|GREM1|HAS2|HEG1|HSPG2|HTR2B|ILK|ITGA5|ITGAV|ITGB1|ITGB3|JAM3|JCAD|LMNA|LOX|LOXL1|LOXL2|LRP1|LUZP1|MAPK7|MEF2A|MEIS1|MICAL2|MMP2|MMP14|MMP19|MSX1|MYH9|MYH11|MYLK|NDNF|NEDD4|NEXN|NOG|NOTCH2|NOTCH3|NOX4|NRP1|NRP2|NXN|OXT|PAM|PARVA|PCSK5|PDGFA|PDGFRA|PDGFRB|PDLIM3|PDPN|PITX2|PKD2|PLN|PLXDC1|PRICKLE1|PRKD1|PRRX1|PTN|RAPGEF2|RGCC|ROCK2|RORA|RUNX1|SALL1|SALL4|SAV1|SCG2|SEMA5A|SERPINB7|SERPINF1|SFRP2|SGCD|SH3PXD2B|SHOX2|SMAD7|SNAI2|SPARC|SPHK1|SPRED1|SRPX2|SULF1|TBX5|TENM4|TGFBI|TGFBR1|THBS1|THBS2|THBS4|THY1|TMEM2|TMEM204|TNFRSF12A|TPM1|TWIST1|UNC5B|VEGFC|WNT2|WNT5A|WT1|ZFPM2	5	0.000934357074642	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7
connective tissue development [GoID:GO:0061448; evidenceTypes:IBA|IDA|IEA|IEP|IMP|ISS|NAS|TAS]	0		2.15676410892e-05	52	1.42107368123e-15	ACTA2|ADAMTS12|ARID5B|AXIN2|BMP1|BMP8A|COL1A1|COL2A1|COL5A1|COL11A1|COMP|CTGF|EVC|FGF18|FGFR1|GLI2|GREM1|LOXL2|LUM|MMP13|MSX1|NKX3-2|NOG|OSR2|PDGFRB|PRRX1|PTH1R|PTHLH|RFLNA|RFLNB|ROR2|RUNX1|RUNX2|SATB2|SCIN|SELENOM|SERPINB7|SERPINH1|SFRP2|SH3PXD2B|SHOX2|SMAD9|SNAI2|SULF1|SULF2|TGFBI|TGFBR1|WNT5A|WNT5B|WT1|ZBTB16|ZEB1	4	4.3135282177e-05	HMGA2|HOXA3|HOXA5|HOXA11
embryo development [GoID:GO:0009790; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		1.82008316574e-07	115	1.98932873003e-12	ACVR1|ACVR2A|ALDH1A3|AXIN2|CACNA1C|COL1A1|COL2A1|COL5A1|COL5A2|COL6A1|COL7A1|COL8A1|COL11A1|COL12A1|CTHRC1|DACT1|DCHS1|DLC1|EDNRA|EFNB1|EXT2|FAM212A|FBN1|FBN2|FGFR1|FN1|FOXF2|FZD1|FZD2|GJA1|GJA5|GLI2|GPR161|GREM1|HEG1|HOPX|HOXD9|HOXD10|HTR2B|IGF2|INHBA|ITGA5|ITGA8|ITGAV|ITGB1|ITGB3|ITGB5|KIAA1217|LAMA1|LAMA2|LAMA4|LAMB1|LATS2|LRIG3|LRP4|LUZP1|MAFB|MAP3K20|MAPK7|MFAP2|MFRP|MICAL2|MMP2|MMP14|MMP16|MSX1|MYADM|MYH9|NKX3-2|NOG|NRK|NRP1|OSR2|PCSK5|PDGFA|PDGFC|PDGFRA|PHLDB2|PITX2|PKD2|PLXNA2|PRICKLE1|PRRX1|RARRES2|RCN1|ROR2|RUNX2|SALL1|SALL4|SATB2|SEPT7|SFRP2|SHOX2|SKI|SULF1|SULF2|TBX5|TBX15|TBX18|TEAD1|TEAD3|TENM4|TGFB1I1|TGFB3|TGFBR1|TWIST1|TWSG1|VEGFC|WLS|WNT2|WNT5A|WT1|ZBTB16|ZEB1|ZFPM2	8	3.6401464382e-07	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7|HOXA9|HOXA10|HOXA11
embryo development ending in birth or egg hatching [GoID:GO:0009792; evidenceTypes:IBA|IC|IDA|IEA|IEP|IMP|ISS|NAS|TAS]	0		1.19419145634e-05	61	1.92146155252e-05	ACVR1|ACVR2A|AXIN2|COL1A1|COL2A1|COL11A1|CTHRC1|DACT1|DCHS1|DLC1|EDNRA|FAM212A|FGFR1|FZD1|FZD2|GJA1|GLI2|GPR161|HEG1|HOPX|HOXD9|HOXD10|IGF2|ITGB1|KIAA1217|LATS2|LUZP1|MMP14|MMP16|MSX1|MYH9|NKX3-2|NOG|NRK|OSR2|PCSK5|PDGFRA|PITX2|PKD2|PLXNA2|PRICKLE1|PRRX1|RARRES2|RCN1|ROR2|RUNX2|SALL4|SATB2|SFRP2|SHOX2|SKI|SULF1|SULF2|TBX15|TGFB3|TGFBR1|TWIST1|WNT2|WNT5A|ZEB1|ZFPM2	6	4.66921360166e-06	HOXA1|HOXA3|HOXA5|HOXA7|HOXA9|HOXA11
embryonic appendage morphogenesis [GoID:GO:0035113; evidenceTypes:IBA|IC|IEA|IMP|ISS|TAS]	0		8.446711447e-05	27	1.42447199024e-08	CACNA1C|FBN2|FGFR1|GJA1|GJA5|GLI2|GREM1|HOXD9|HOXD10|LRP4|MAP3K20|MSX1|NOG|OSR2|PITX2|PRRX1|ROR2|RUNX2|SALL1|SALL4|SFRP2|SHOX2|SKI|TBX5|TWIST1|WNT5A|ZBTB16	3	0.00016891998422	HOXA9|HOXA10|HOXA11
embryonic forelimb morphogenesis [GoID:GO:0035115; evidenceTypes:IEA|IMP|ISS]	0		0.00043571125329	8	0.000529957069843	CACNA1C|HOXD9|MSX1|OSR2|RUNX2|SHOX2|TBX5|TWIST1	2	0.000341465436736	HOXA9|HOXA11
embryonic limb morphogenesis [GoID:GO:0030326; evidenceTypes:IBA|IC|IEA|IMP|ISS|TAS]	0		8.446711447e-05	27	1.42447199024e-08	CACNA1C|FBN2|FGFR1|GJA1|GJA5|GLI2|GREM1|HOXD9|HOXD10|LRP4|MAP3K20|MSX1|NOG|OSR2|PITX2|PRRX1|ROR2|RUNX2|SALL1|SALL4|SFRP2|SHOX2|SKI|TBX5|TWIST1|WNT5A|ZBTB16	3	0.00016891998422	HOXA9|HOXA10|HOXA11
embryonic morphogenesis [GoID:GO:0048598; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		3.52335397388e-09	85	4.75426437355e-14	ACVR1|ACVR2A|ALDH1A3|CACNA1C|COL2A1|COL5A1|COL5A2|COL6A1|COL7A1|COL8A1|COL11A1|COL12A1|CTHRC1|DACT1|DLC1|EXT2|FBN1|FBN2|FGFR1|FN1|FOXF2|FZD1|FZD2|GJA1|GJA5|GLI2|GREM1|HOXD9|HOXD10|HTR2B|IGF2|INHBA|ITGA5|ITGA8|ITGAV|ITGB1|ITGB3|ITGB5|LAMB1|LATS2|LRIG3|LRP4|LUZP1|MAFB|MAP3K20|MAPK7|MFAP2|MICAL2|MMP2|MMP14|MMP16|MSX1|MYADM|NKX3-2|NOG|OSR2|PDGFRA|PHLDB2|PITX2|PKD2|PRICKLE1|PRRX1|ROR2|RUNX2|SALL1|SALL4|SATB2|SFRP2|SHOX2|SKI|SULF1|TBX5|TBX15|TENM4|TGFB1I1|TGFB3|TGFBR1|TWIST1|TWSG1|VEGFC|WLS|WNT2|WNT5A|ZBTB16|ZEB1	8	7.04666040511e-09	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7|HOXA9|HOXA10|HOXA11
embryonic organ development [GoID:GO:0048568; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS|TAS]	0		1.67129145194e-05	50	1.30938798399e-05	ACVR1|ALDH1A3|COL2A1|COL11A1|CTHRC1|FBN1|FBN2|FGFR1|FOXF2|FZD2|GJA1|GJA5|GLI2|HOXD9|HOXD10|IGF2|ITGA8|LRIG3|MAFB|MFAP2|MICAL2|MMP14|MMP16|MSX1|NKX3-2|NOG|NRK|OSR2|PCSK5|PDGFA|PDGFRA|PITX2|PKD2|PRRX1|RARRES2|ROR2|RUNX2|SALL1|SATB2|SHOX2|TBX15|TEAD1|TEAD3|TGFB3|TGFBR1|TWIST1|WNT2|WNT5A|ZEB1|ZFPM2	5	2.03319491988e-05	HOXA1|HOXA3|HOXA5|HOXA7|HOXA11
embryonic organ morphogenesis [GoID:GO:0048562; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS]	0		2.04513274464e-06	40	1.15054511265e-06	ACVR1|ALDH1A3|COL2A1|COL11A1|CTHRC1|FBN1|FBN2|FGFR1|FOXF2|FZD2|GJA1|GLI2|HOXD9|HOXD10|ITGA8|LRIG3|MAFB|MFAP2|MICAL2|MMP14|MMP16|MSX1|NKX3-2|NOG|OSR2|PDGFRA|PITX2|PKD2|PRRX1|ROR2|RUNX2|SALL1|SATB2|SHOX2|TBX15|TGFB3|TGFBR1|TWIST1|WNT5A|ZEB1	5	2.93972037663e-06	HOXA1|HOXA3|HOXA5|HOXA7|HOXA11
embryonic skeletal system development [GoID:GO:0048706; evidenceTypes:IBA|IDA|IEA|IEP|IMP|ISS]	0		1.76050286815e-08	26	3.46416176697e-08	ACVR2A|COL1A1|COL2A1|COL11A1|HOXD9|HOXD10|KIAA1217|MMP14|MMP16|NKX3-2|NOG|OSR2|PCSK5|PDGFRA|PRRX1|RUNX2|SATB2|SHOX2|SULF1|SULF2|TBX15|TGFB3|TGFBR1|TWIST1|WNT5A|ZEB1	6	5.68439693389e-10	HOXA1|HOXA3|HOXA5|HOXA7|HOXA9|HOXA11
embryonic skeletal system morphogenesis [GoID:GO:0048704; evidenceTypes:IBA|IDA|IEA|IMP|ISS]	0		9.05197069144e-06	18	1.80920758597e-05	COL2A1|COL11A1|HOXD9|HOXD10|MMP14|MMP16|NOG|OSR2|PDGFRA|PRRX1|RUNX2|SATB2|SHOX2|TBX15|TGFB3|TGFBR1|TWIST1|ZEB1	5	1.1865523183e-08	HOXA1|HOXA3|HOXA5|HOXA7|HOXA11
forelimb morphogenesis [GoID:GO:0035136; evidenceTypes:IDA|IEA|IMP|ISS]	0		0.000305063404132	10	9.57653839572e-05	CACNA1C|HOXD9|HOXD10|MSX1|OSR2|RUNX2|SHOX2|TBX5|TWIST1|ZBTB16	2	0.000514361424306	HOXA9|HOXA11
limb development [GoID:GO:0060173; evidenceTypes:IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000192343683153	32	1.86696661276e-08	CACNA1C|COL2A1|COMP|FBN2|FGFR1|GJA1|GJA5|GLI2|GREM1|HOXD9|HOXD10|LRP4|MAP3K20|MSX1|NOG|OSR2|PAM|PCSK5|PITX2|PLXNA2|PRRX1|ROR2|RUNX2|SALL1|SALL4|SFRP2|SHOX2|SKI|TBX5|TWIST1|WNT5A|ZBTB16	3	0.00038466869664	HOXA9|HOXA10|HOXA11
limb morphogenesis [GoID:GO:0035108; evidenceTypes:IBA|IC|IEA|IMP|ISS|TAS]	0		0.000125995466726	30	5.21917973462e-09	CACNA1C|COL2A1|FBN2|FGFR1|GJA1|GJA5|GLI2|GREM1|HOXD9|HOXD10|LRP4|MAP3K20|MSX1|NOG|OSR2|PCSK5|PITX2|PLXNA2|PRRX1|ROR2|RUNX2|SALL1|SALL4|SFRP2|SHOX2|SKI|TBX5|TWIST1|WNT5A|ZBTB16	3	0.000251985714272	HOXA9|HOXA10|HOXA11
skeletal system development [GoID:GO:0001501; evidenceTypes:IBA|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	1	HOXA13	2.8737233371e-11	101	8.01926412126e-28	ACVR2A|ADAMTS4|ADAMTS12|AEBP1|AKAP13|ANKH|ANO6|ARID5B|ARSE|AXIN2|BMP1|BMP8A|CDH11|COL1A1|COL1A2|COL2A1|COL3A1|COL5A2|COL10A1|COL11A1|COL12A1|COMP|CTGF|DCHS1|EVC|FAM20C|FBN1|FBN2|FGF18|FGFR1|FOXP1|GJA5|GLI2|GPR68|GREM1|HAPLN1|HAS2|HOXD9|HOXD10|IGF2|IGFBP4|KIAA1217|KLF10|LOXL2|LRRC17|LUM|MATN3|MEIS1|MMP2|MMP13|MMP14|MMP16|MSX1|NKX3-2|NOG|NPR2|NPR3|OSR2|P3H1|PCSK5|PDGFC|PDGFRA|PITX2|PLS3|POSTN|PRELP|PRRX1|PTH1R|PTHLH|RAB23|RFLNA|RFLNB|ROR2|RUNX1|RUNX2|SATB2|SCIN|SERPINH1|SFRP2|SFRP4|SH3PXD2B|SHOX2|SKI|SMAD9|SNAI2|SPARC|SULF1|SULF2|TBX15|TGFB3|TGFBI|TGFBR1|TLL1|TMEM119|TWIST1|VCAN|VDR|WNT5A|WNT5B|ZBTB16|ZEB1	8	5.7474466742e-11	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7|HOXA9|HOXA10|HOXA11
skeletal system morphogenesis [GoID:GO:0048705; evidenceTypes:IBA|IDA|IEA|IGI|IMP|ISS|TAS]	0		3.48243344552e-07	41	5.50584747222e-11	ARID5B|AXIN2|BMP1|COL1A1|COL2A1|COL11A1|COMP|CTGF|FBN2|FGF18|FGFR1|GREM1|HAS2|HOXD9|HOXD10|MMP2|MMP13|MMP14|MMP16|MSX1|NKX3-2|NOG|OSR2|PDGFRA|PRRX1|RAB23|RFLNB|ROR2|RUNX2|SATB2|SERPINH1|SFRP2|SFRP4|SH3PXD2B|SHOX2|SKI|TBX15|TGFB3|TGFBR1|TWIST1|ZEB1	5	6.9643163063e-07	HOXA1|HOXA3|HOXA5|HOXA7|HOXA11
vasculature development [GoID:GO:0001944; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|ISS|NAS|TAS]	0		7.42231958935e-05	107	2.17672646264e-21	ACKR3|ACTA2|ACVR1|ADGRA2|AHR|ANTXR1|ARHGAP24|C3|CDH2|CDH13|CLIC4|COL1A1|COL1A2|COL3A1|COL5A1|COL8A1|COL8A2|COL18A1|CTGF|CYP1B1|DCN|ECM1|EDNRA|FAP|FBXW7|FGF1|FGF18|FGFR1|FN1|FOXO1|GJA1|GJA5|GJC1|GREM1|HAS2|HEG1|HSPG2|ITGA5|ITGAV|ITGB1|ITGB3|JAM3|JCAD|LOX|LOXL1|LOXL2|LRP1|LUZP1|MAPK7|MEIS1|MMP2|MMP14|MMP19|MYH9|MYLK|NDNF|NEDD4|NOG|NOTCH3|NRP1|NRP2|PARVA|PCSK5|PDGFA|PDGFRA|PDGFRB|PDPN|PITX2|PKD2|PLXDC1|PRICKLE1|PRKD1|PRRX1|PTN|RAPGEF2|RGCC|ROCK2|RORA|RUNX1|SCG2|SEMA5A|SERPINB7|SERPINF1|SFRP2|SMAD7|SPARC|SPHK1|SPRED1|SRPX2|SULF1|TBX5|TGFBI|TGFBR1|THBS1|THBS2|THBS4|THY1|TMEM2|TMEM204|TNFRSF12A|TWIST1|UNC5B|VEGFC|WNT2|WNT5A|WT1|ZFPM2	5	0.000148446391787	HMGA2|HOXA1|HOXA3|HOXA5|HOXA7
